<?xml version="1.0" encoding="utf-8" ?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:r="https://r-universe.dev"><channel><title>elisabettasciacca.r-universe.dev</title><link>https://elisabettasciacca.r-universe.dev</link><description>Recent package updates in elisabettasciacca</description><generator>R-universe</generator><image><url>https://github.com/elisabettasciacca.png</url><title>R packages by elisabettasciacca</title><link>https://elisabettasciacca.r-universe.dev</link></image><lastBuildDate>Tue, 16 Jun 2026 12:07:41 GMT</lastBuildDate><item><title>[elisabettasciacca] multiDEGGs 1.2.1.9000</title><author>e.sciacca@qmul.ac.uk (Elisabetta Sciacca)</author><description>Performs multi-omic differential network analysis by
revealing differential interactions between molecular entities
(genes, proteins, transcription factors, or other biomolecules)
across the omic datasets provided. For each omic dataset, a
differential network is constructed where links represent
statistically significant differential interactions between
entities. These networks are then integrated into a
comprehensive visualization using distinct colors to
distinguish interactions from different omic layers. This
unified display allows interactive exploration of cross-omic
patterns, such as differential interactions present at both
transcript and protein levels. For each link, users can access
differential statistical significance metrics (p values or
adjusted p values, calculated via robust or traditional linear
regression with interaction term) and differential regression
plots. The methods implemented in this package are described in
Sciacca et al. (2023) &lt;doi:10.1093/bioinformatics/btad192&gt;.</description><link>https://github.com/r-universe/elisabettasciacca/actions/runs/27618464168</link><pubDate>Tue, 16 Jun 2026 12:07:41 GMT</pubDate><r:package>multiDEGGs</r:package><r:version>1.2.1.9000</r:version><r:status>success</r:status><r:repository>https://elisabettasciacca.r-universe.dev</r:repository><r:upstream>https://github.com/elisabettasciacca/multideggs</r:upstream><r:article><r:source>Differential_Network_Analysis.Rmd</r:source><r:filename>Differential_Network_Analysis.html</r:filename><r:title>Differential Network Analysis with multiDEGGs</r:title><r:created>2026-03-23 15:27:57</r:created><r:modified>2026-03-24 09:19:59</r:modified></r:article><r:article><r:source>Feature_Selection.Rmd</r:source><r:filename>Feature_Selection.html</r:filename><r:title>Feature Selection and Feature Engineering with multiDEGGs</r:title><r:created>2026-02-02 14:21:22</r:created><r:modified>2026-04-01 10:36:50</r:modified></r:article><r:article><r:source>multiDEGGs_vignette.Rmd</r:source><r:filename>multiDEGGs_vignette.html</r:filename><r:title>Differential Network Analysis with multiDEGGs</r:title><r:created>2025-05-13 13:13:40</r:created><r:modified>2026-06-16 12:07:41</r:modified></r:article></item></channel></rss>